STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T08_11887Uncharacterized protein. (92 aa)    
Predicted Functional Partners:
SIRT1
NAD-dependent protein deacetylase sirtuin-1.
    
 0.622
Suv39h1
Histone-lysine N-methyltransferase SUV39H1.
    
 0.619
brix1
Ribosome biogenesis protein BRX1-like protein.
   
   0.605
T08_11377
Pumilio domain-containing protein-like protein.
   
 
 0.601
Ddx27
Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family.
   
 
 0.597
C18A3.3
Putative rRNA-processing protein EBP2-like protein.
   
   0.596
Rpf2
Ribosome production factor 2-like protein.
   
   0.592
WDR3
WD repeat-containing protein 3.
   
   0.584
Setmar
Histone-lysine N-methyltransferase SETMAR.
    
 0.582
Ftsj3
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.546
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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