STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T08_16745Uncharacterized protein. (288 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.805
unc-89-2
Muscle M-line assembly protein unc-89.
    
 0.780
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.780
KDM6A
Lysine-specific demethylase 6A.
    
 0.695
TONSL
Tonsoku-like protein.
    
 0.678
Mrps11
28S ribosomal protein S11, mitochondrial.
    
  0.525
GTF3C3
General transcription factor 3C polypeptide 3.
    
 0.520
GTF3C5
General transcription factor 3C polypeptide 5.
    
 0.520
Mrps28
28S ribosomal protein S28, mitochondrial.
    
  0.518
mRpS6
Putative 28S ribosomal protein S6, mitochondrial.
    
  0.518
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.