STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGGBP1-2CGG triplet repeat-binding protein 1. (165 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.893
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
   
 0.805
Gak
Cyclin-G-associated kinase.
   
 0.717
Ift81
Intraflagellar transport protein 81-like protein.
    
 0.701
UBXN7
UBX domain-containing protein 7.
    
 0.697
Als2
Alsin.
   
 0.697
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.687
sem-5
Sex muscle abnormal protein 5.
    
  0.670
Ift52
Intraflagellar transport protein 52-like protein.
    
 0.668
ned-8
Nedd8.
    
  0.668
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.