Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL4 | GATA6 | A0A0V1NR26 | A0A0V1PGS1 | Achaete-scute-like protein 4. | Transcription factor-like protein. | 0.691 |
ASCL4 | Gata3 | A0A0V1NR26 | A0A0V1NLI0 | Achaete-scute-like protein 4. | Trans-acting T-cell-specific transcription factor GATA-3. | 0.691 |
ASCL4 | LDB2 | A0A0V1NR26 | A0A0V1PI83 | Achaete-scute-like protein 4. | LIM domain-binding protein 2. | 0.774 |
ASCL4 | Pax2 | A0A0V1NR26 | A0A0V1PC15 | Achaete-scute-like protein 4. | Paired box protein Pax-2. | 0.534 |
ASCL4 | TCF3 | A0A0V1NR26 | A0A0V1NR41 | Achaete-scute-like protein 4. | Transcription factor E2-alpha. | 0.965 |
ASCL4 | lhx1 | A0A0V1NR26 | A0A0V1NSV4 | Achaete-scute-like protein 4. | LIM/homeobox protein Lhx1. | 0.657 |
Ccnk | lhx1 | A0A0V1PNW4 | A0A0V1NSV4 | Cyclin-K. | LIM/homeobox protein Lhx1. | 0.971 |
GATA6 | ASCL4 | A0A0V1PGS1 | A0A0V1NR26 | Transcription factor-like protein. | Achaete-scute-like protein 4. | 0.691 |
GATA6 | Gata3 | A0A0V1PGS1 | A0A0V1NLI0 | Transcription factor-like protein. | Trans-acting T-cell-specific transcription factor GATA-3. | 0.775 |
GATA6 | LDB2 | A0A0V1PGS1 | A0A0V1PI83 | Transcription factor-like protein. | LIM domain-binding protein 2. | 0.831 |
GATA6 | Nhlh1 | A0A0V1PGS1 | A0A0V1PEC6 | Transcription factor-like protein. | Helix-loop-helix protein 1. | 0.691 |
GATA6 | TCF3 | A0A0V1PGS1 | A0A0V1NR41 | Transcription factor-like protein. | Transcription factor E2-alpha. | 0.697 |
GATA6 | hlh-6 | A0A0V1PGS1 | A0A0V1NGC8 | Transcription factor-like protein. | Helix-loop-helix protein 6. | 0.691 |
GATA6 | lhx1 | A0A0V1PGS1 | A0A0V1NSV4 | Transcription factor-like protein. | LIM/homeobox protein Lhx1. | 0.758 |
GATA6 | ptf1a | A0A0V1PGS1 | A0A0V1PMY5 | Transcription factor-like protein. | Pancreas transcription factor 1 subunit alpha. | 0.706 |
Gata3 | ASCL4 | A0A0V1NLI0 | A0A0V1NR26 | Trans-acting T-cell-specific transcription factor GATA-3. | Achaete-scute-like protein 4. | 0.691 |
Gata3 | GATA6 | A0A0V1NLI0 | A0A0V1PGS1 | Trans-acting T-cell-specific transcription factor GATA-3. | Transcription factor-like protein. | 0.775 |
Gata3 | LDB2 | A0A0V1NLI0 | A0A0V1PI83 | Trans-acting T-cell-specific transcription factor GATA-3. | LIM domain-binding protein 2. | 0.855 |
Gata3 | Nhlh1 | A0A0V1NLI0 | A0A0V1PEC6 | Trans-acting T-cell-specific transcription factor GATA-3. | Helix-loop-helix protein 1. | 0.691 |
Gata3 | TCF3 | A0A0V1NLI0 | A0A0V1NR41 | Trans-acting T-cell-specific transcription factor GATA-3. | Transcription factor E2-alpha. | 0.707 |
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