STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnd-1Neurogenic differentiation factor 1. (264 aa)    
Predicted Functional Partners:
INSM1
Insulinoma-associated protein 1.
   
 0.740
TCF3
Transcription factor E2-alpha.
    
 
 0.717
nkx2.2a
Homeobox protein Nkx-2.2a.
   
 0.678
NEUROG3
Neurogenin-3.
  
  
0.625
T08_12655
Phosphotransferase.
     
 0.589
Gart
Trifunctional purine biosynthetic protein adenosine-3.
      
 0.576
pan
Protein pangolin, isoforms A/H/I/S.
    
 
 0.554
ASCL4
Achaete-scute-like protein 4.
  
 
0.550
foxg1
Forkhead box protein G1.
   
  
 0.524
HLHmgamma
Enhancer of split mgamma protein.
   
 0.488
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.