Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHD3 | KDM6A | A0A0V1PN99 | A0A0V1NHJ3 | Chromodomain-helicase-DNA-binding protein 3. | Lysine-specific demethylase 6A. | 0.611 |
CHD3 | Polr3c | A0A0V1PN99 | A0A0V1PEB4 | Chromodomain-helicase-DNA-binding protein 3. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.450 |
CHD3 | RUVBL1 | A0A0V1PN99 | A0A0V1NZL5 | Chromodomain-helicase-DNA-binding protein 3. | DNA helicase; Belongs to the RuvB family. | 0.821 |
CHD3 | TONSL | A0A0V1PN99 | A0A0V1P063 | Chromodomain-helicase-DNA-binding protein 3. | Tonsoku-like protein. | 0.478 |
CHD3 | Znf691 | A0A0V1PN99 | A0A0V1NZ33 | Chromodomain-helicase-DNA-binding protein 3. | Zinc finger protein. | 0.688 |
CHD3 | lrk-1 | A0A0V1PN99 | A0A0V1NR07 | Chromodomain-helicase-DNA-binding protein 3. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.648 |
GTF3C3 | Polr3c | A0A0V1NJM1 | A0A0V1PEB4 | General transcription factor 3C polypeptide 3. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.857 |
GTF3C3 | Znf691 | A0A0V1NJM1 | A0A0V1NZ33 | General transcription factor 3C polypeptide 3. | Zinc finger protein. | 0.694 |
KDM6A | CHD3 | A0A0V1NHJ3 | A0A0V1PN99 | Lysine-specific demethylase 6A. | Chromodomain-helicase-DNA-binding protein 3. | 0.611 |
KDM6A | RUVBL1 | A0A0V1NHJ3 | A0A0V1NZL5 | Lysine-specific demethylase 6A. | DNA helicase; Belongs to the RuvB family. | 0.961 |
KDM6A | TONSL | A0A0V1NHJ3 | A0A0V1P063 | Lysine-specific demethylase 6A. | Tonsoku-like protein. | 0.615 |
KDM6A | Znf691 | A0A0V1NHJ3 | A0A0V1NZ33 | Lysine-specific demethylase 6A. | Zinc finger protein. | 0.695 |
KDM6A | lrk-1 | A0A0V1NHJ3 | A0A0V1NR07 | Lysine-specific demethylase 6A. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.970 |
KDM6A | ssl-1 | A0A0V1NHJ3 | A0A0V1PI46 | Lysine-specific demethylase 6A. | Helicase ssl-1. | 0.625 |
KDM6A | unc-89-2 | A0A0V1NHJ3 | A0A0V1PHM0 | Lysine-specific demethylase 6A. | Muscle M-line assembly protein unc-89. | 0.529 |
KDM6A | unc-89-3 | A0A0V1NHJ3 | A0A0V1PHM2 | Lysine-specific demethylase 6A. | Muscle M-line assembly protein unc-89. | 0.529 |
Polr3c | CHD3 | A0A0V1PEB4 | A0A0V1PN99 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Chromodomain-helicase-DNA-binding protein 3. | 0.450 |
Polr3c | GTF3C3 | A0A0V1PEB4 | A0A0V1NJM1 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | General transcription factor 3C polypeptide 3. | 0.857 |
Polr3c | Znf691 | A0A0V1PEB4 | A0A0V1NZ33 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Zinc finger protein. | 0.675 |
Polr3c | lrk-1 | A0A0V1PEB4 | A0A0V1NR07 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.571 |
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