STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC33A1Acetyl-coenzyme A transporter 1. (552 aa)    
Predicted Functional Partners:
LOXHD1
Lipoxygenase homology domain-containing protein 1.
    
  0.614
UBXN6
UBX domain-containing protein 6.
    
  0.529
Aspscr1
Tether containing UBX domain for GLUT4.
    
  0.529
TYMS
Thymidylate synthase.
    
  0.515
MVK
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.502
CSTF3
Cleavage stimulation factor subunit 3; Belongs to the actin family.
    
 0.502
Cstf3
Cleavage stimulation factor subunit 3.
    
 0.502
YNK1
Nucleoside diphosphate kinase.
    
  0.498
MRPS34
28S ribosomal protein S34, mitochondrial.
    
  0.498
SAMDC
S-adenosylmethionine decarboxylase proenzyme.
    
 
 0.494
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.