STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc11Trafficking protein particle complex subunit 11. (1173 aa)    
Predicted Functional Partners:
TRAPPC8
Trafficking protein particle complex subunit 8.
   
 0.999
Trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.999
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.999
TRAPPC4
Trafficking protein particle complex subunit 4.
    
 0.998
T08_16326
Putative trafficking protein particle complex subunit 13-like protein.
   
 0.995
RAB1A
Ras-related protein Rab-1A.
    
 0.737
RAB43
Ras-related protein Rab-43.
    
 0.708
TBXAS1
Rab-like protein 6.
    
 0.693
rab-33
Ras-related protein Rab-33.
    
 0.693
WDR11
WD repeat-containing protein 11.
   
    0.643
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.