STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAMPAngio-associated migratory cell protein. (371 aa)    
Predicted Functional Partners:
RpL10
60S ribosomal protein L10.
    
 
 0.995
Mrpl16
39S ribosomal protein L16, mitochondrial.
    
 
 0.873
Grwd1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.864
TONSL
Tonsoku-like protein.
   
 
 0.717
Nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.701
Tbl3
Transducin beta-like protein 3.
   
    0.686
T08_8786
Ribosome biogenesis protein WDR12-like protein.
  
  
 0.680
Utp18
U3 small nucleolar RNA-associated protein 18-like protein.
   
  
 0.650
bop1-b
Ribosome biogenesis protein bop1-B.
   
  
 0.619
T08_10077
Putative H/ACA ribonucleoprotein complex subunit 2-like protein.
   
   0.609
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.