STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIOK3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (495 aa)    
Predicted Functional Partners:
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.949
Ltv1
Protein LTV1-like protein.
   
 0.935
pno1
RNA-binding protein pno1.
   
 0.934
Tsr1
T-complex protein 1 subunit theta.
   
 0.885
RIOK2
Serine/threonine-protein kinase RIO2.
   
 
 0.884
rps3-a
40S ribosomal protein S3-A.
   
 0.883
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.857
RPS6
40S ribosomal protein S6.
  
  0.850
RPS3A
40S ribosomal protein S3a.
   
 0.847
rps-25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
    
  0.829
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.