STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RpL860S ribosomal protein L8. (259 aa)    
Predicted Functional Partners:
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
RpL5
60S ribosomal protein L5.
  
 0.999
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.999
RpL13A
60S ribosomal protein L13a.
  
 0.999
Gnb2l1
Guanine nucleotide-binding protein subunit beta-2-like 1.
   
 
 0.999
RPS5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.999
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
RPL28
60S ribosomal protein L28.
   
 0.999
tef2
Elongation factor 2.
  
 0.999
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.