STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxd1Homeobox protein Hox-D1. (489 aa)    
Predicted Functional Partners:
exd
Homeobox protein extradenticle.
    
 0.882
Abd-B
Homeobox protein abdominal-B.
  
 
 
0.673
MEIS2
Homeobox protein Meis2.
   
 0.648
nhr-25
Nuclear hormone receptor family member nhr-25.
    
 0.483
pan
Protein pangolin, isoforms A/H/I/S.
    
 0.436
gsb-n
Protein gooseberry-neuro.
   
 0.416
PAX6
Paired box protein Pax-6.
   
0.416
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.