STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eral1GTPase Era, mitochondrial. (424 aa)    
Predicted Functional Partners:
mrps7
28S ribosomal protein S7, mitochondrial.
   
 0.998
mrps-16
Putative 28S ribosomal protein S16, mitochondrial.
   
 0.998
DAP3
28S ribosomal protein S29, mitochondrial.
    
 0.998
mRpS6
Putative 28S ribosomal protein S6, mitochondrial.
   
  0.997
mlc-4
Putative myosin regulatory light chain.
  
 0.997
MRPS10
28S ribosomal protein S10, mitochondrial.
  
 0.997
T08_14164
Protein PTCD3-like protein, mitochondrial.
    
 0.996
T08_9269
Protein MEF2BNB-like protein.
   
 0.996
MRPS2
28S ribosomal protein S2, mitochondrial.
  
 0.995
mrps-25
Putative 28S ribosomal protein S25, mitochondrial.
    
 0.994
Your Current Organism:
Trichinella sp. T8
NCBI taxonomy Id: 92180
Other names: T. sp. T8, Trichinella T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.