STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_08479Lamin-B2; Belongs to the intermediate filament family. (608 aa)    
Predicted Functional Partners:
AS27_15616
Caspase-6; Belongs to the peptidase C14A family.
    
 0.870
AS27_13603
Barrier-to-autointegration factor.
   
 0.837
AS27_10063
Inner nuclear membrane protein Man1.
    
 0.746
AS27_07879
SUN domain-containing protein 2.
    
 0.710
AS27_02455
Granzyme K.
    
  0.707
AS27_12227
SUN domain-containing protein 1.
    
 0.692
AS27_09840
Rho GTPase-activating protein 39.
    
  0.652
AS27_10963
Caspase-3; Belongs to the peptidase C14A family.
   
 0.636
AS27_13297
Centromere protein U.
   
 0.621
AS27_05512
Caspase-2; Belongs to the peptidase C14A family.
    
 0.617
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.