Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AS27_13010Calsyntenin-1. (941 aa)    
Predicted Functional Partners:
AS27_14894
Amyloid beta A4 protein-binding family A member 2.
    
 
 0.959
AS27_04802
Amyloid beta A4 protein.
   
 
 0.919
AS27_00443
Kinesin light chain 1.
    
 
 0.744
AS27_04645
Kinesin light chain 1.
    
 
 0.744
AS27_06756
Tensin.
      
 0.600
AS27_13947
SUMO-activating enzyme subunit 2.
      
 0.598
AS27_06835
Stromal membrane-associated protein 1.
      
 0.569
AS27_02003
Cyclin-dependent kinase 18; Belongs to the protein kinase superfamily.
      
 0.566
AS27_08159
Sulfhydryl oxidase.
      
 0.548
AS27_13726
Sulfhydryl oxidase.
      
 0.548
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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