STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_09424Rho-related BTB domain-containing protein 1. (689 aa)    
Predicted Functional Partners:
AS27_03842
Intersectin-2.
    
 0.997
AS27_04844
Intersectin-1.
    
 0.950
AS27_04112
Cullin-3; Belongs to the cullin family.
    
 0.881
AS27_03341
Kelch-like 17.
    
  0.859
AS27_07265
Kelch-like 13.
    
  0.859
AS27_07025
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.815
AS27_10892
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.815
AS27_06809
Kalirin.
   
 0.803
AS27_08178
Kelch-like 20.
    
  0.784
AS27_07549
Kelch-like 34.
    
 
0.784
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.