STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_15538Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)    
Predicted Functional Partners:
AS27_14832
HBS1-like.
   
 
 0.992
AS27_10124
Guanine nucleotide-binding protein subunit beta-2-like 1.
    
 
 0.947
AS27_05762
ATP-binding cassette sub-family E member 1.
  
 
 0.940
AS27_05952
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.924
AS27_10754
40S ribosomal protein S6.
   
 
 0.915
AS27_01762
40S ribosomal protein S20.
    
 
 0.909
AS27_04181
Ubiquitin-40S ribosomal protein S27a.
    
   0.900
AS27_02060
40S ribosomal protein S10.
    
 
 0.899
AS27_00670
40S ribosomal protein S17.
   
 
 0.897
AS27_14842
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.893
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.