STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_09257Polycomb complex protein BMI-1. (297 aa)    
Predicted Functional Partners:
AS27_08110
E3 ubiquitin-protein ligase RING2.
   
 0.962
AS27_09310
Chromobox protein 8.
    
 0.951
AS27_10094
Polycomb protein SCMH1.
    
 0.874
AS27_09311
E3 SUMO-protein ligase CBX4.
    
 0.869
AS27_14263
Polyhomeotic-like 1.
    
 0.834
AS27_09309
Chromobox protein 2.
    
 0.815
AS27_07883
Chromobox protein 7.
    
 0.796
AS27_07197
RING1 and YY1-binding protein.
    
 0.790
AS27_00324
YY1-associated factor 2.
    
 0.790
AS27_07882
Chromobox protein 6.
    
 0.765
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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