Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AS27_00091 | AS27_00346 | A0A087QWM6 | A0A087RDT0 | RNA polymerase-associated protein LEO1. | Parafibromin. | 0.999 |
AS27_00091 | AS27_02310 | A0A087QWM6 | A0A087QYP4 | RNA polymerase-associated protein LEO1. | RNA polymerase-associated protein RTF1. | 0.999 |
AS27_00091 | AS27_04624 | A0A087QWM6 | A0A087R592 | RNA polymerase-associated protein LEO1. | Cyclin-dependent kinase 2-interacting protein. | 0.999 |
AS27_00091 | AS27_05260 | A0A087QWM6 | A0A087QWI3 | RNA polymerase-associated protein LEO1. | Transcription elongation factor SPT4. | 0.997 |
AS27_00091 | AS27_06160 | A0A087QWM6 | A0A087QRX3 | RNA polymerase-associated protein LEO1. | WD repeat-containing protein 61. | 0.998 |
AS27_00091 | AS27_08931 | A0A087QWM6 | A0A087QWB6 | RNA polymerase-associated protein LEO1. | Transcription elongation factor B polypeptide 3. | 0.996 |
AS27_00091 | AS27_09097 | A0A087QWM6 | A0A087RJ56 | RNA polymerase-associated protein LEO1. | 182 kDa tankyrase-1-binding protein. | 0.999 |
AS27_00091 | AS27_09098 | A0A087QWM6 | A0A087RJ57 | RNA polymerase-associated protein LEO1. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.999 |
AS27_00091 | AS27_12797 | A0A087QWM6 | A0A087R9Q9 | RNA polymerase-associated protein LEO1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
AS27_00091 | AS27_13430 | A0A087QWM6 | A0A087QZV6 | RNA polymerase-associated protein LEO1. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.997 |
AS27_00346 | AS27_00091 | A0A087RDT0 | A0A087QWM6 | Parafibromin. | RNA polymerase-associated protein LEO1. | 0.999 |
AS27_00346 | AS27_02310 | A0A087RDT0 | A0A087QYP4 | Parafibromin. | RNA polymerase-associated protein RTF1. | 0.996 |
AS27_00346 | AS27_04624 | A0A087RDT0 | A0A087R592 | Parafibromin. | Cyclin-dependent kinase 2-interacting protein. | 0.999 |
AS27_00346 | AS27_05260 | A0A087RDT0 | A0A087QWI3 | Parafibromin. | Transcription elongation factor SPT4. | 0.956 |
AS27_00346 | AS27_06160 | A0A087RDT0 | A0A087QRX3 | Parafibromin. | WD repeat-containing protein 61. | 0.997 |
AS27_00346 | AS27_08931 | A0A087RDT0 | A0A087QWB6 | Parafibromin. | Transcription elongation factor B polypeptide 3. | 0.828 |
AS27_00346 | AS27_09097 | A0A087RDT0 | A0A087RJ56 | Parafibromin. | 182 kDa tankyrase-1-binding protein. | 0.953 |
AS27_00346 | AS27_09098 | A0A087RDT0 | A0A087RJ57 | Parafibromin. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.956 |
AS27_00346 | AS27_12797 | A0A087RDT0 | A0A087R9Q9 | Parafibromin. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.952 |
AS27_00346 | AS27_13430 | A0A087RDT0 | A0A087QZV6 | Parafibromin. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.959 |
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