STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_00125Ubiquitin carboxyl-terminal hydrolase 8; Belongs to the peptidase C19 family. (1085 aa)    
Predicted Functional Partners:
AS27_12153
E3 ubiquitin-protein ligase NRDP1.
    
 0.983
AS27_13468
Polyubiquitin-B.
   
 0.966
AS27_04181
Ubiquitin-40S ribosomal protein S27a.
    
 0.946
AS27_00871
Ubiquitin-40S ribosomal protein S27a.
   
 0.932
AS27_02210
14-3-3 protein zeta; Belongs to the 14-3-3 family.
    
 0.906
AS27_03812
Signal transducing adapter molecule 2.
    
 0.890
AS27_03762
Signal transducing adapter molecule 1.
    
 0.874
AS27_01208
E3 ubiquitin-protein ligase parkin.
     
 0.863
AS27_07788
Receptor protein-tyrosine kinase.
    
 0.861
AS27_09342
Receptor protein-tyrosine kinase.
    
 0.861
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.