STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_09181Craniofacial development protein 1; May play a role during embryogenesis. (238 aa)    
Predicted Functional Partners:
AS27_11710
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 
 0.946
AS27_00917
DNA methyltransferase 1-associated protein 1.
   
 
 0.942
AS27_15577
Histone H2A; Belongs to the histone H2A family.
    
 
 0.935
AS27_07623
Vacuolar protein sorting-associated protein 72.
   
 
 0.831
AS27_09683
YEATS domain-containing protein 4.
   
 
 0.808
AS27_08194
Primary ciliary dyskinesia protein 1.
    
 
 0.748
AS27_06781
Transmembrane protein 177.
    
 
 0.748
AS27_14106
Actin-like 6A; Belongs to the actin family.
    
 
 0.645
AS27_06116
Bromodomain testis-specific protein.
    
 
 0.527
AS27_13752
Bromodomain-containing protein 4.
    
 
 0.527
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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