STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_07521U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (461 aa)    
Predicted Functional Partners:
AS27_06404
Serine/arginine-rich splicing factor 2.
   
0.855
AS27_00858
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.843
AS27_03996
RNA-binding protein 40.
   
 
 0.751
AS27_08951
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
   
 
 0.744
AS27_08454
Serine/arginine-rich splicing factor 5.
   
 0.705
AS27_08464
Serine/arginine-rich splicing factor 4.
   
 0.705
AS27_09859
Serine/arginine-rich splicing factor 6.
   
 0.705
AS27_09661
Serine/arginine-rich splicing factor 4.
   
 0.705
AS27_08634
Zinc finger protein 318.
   
 0.703
AS27_04093
Splicing factor 3B subunit 1.
   
 
 0.698
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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