STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_13532SpoU_sub_bind domain-containing protein. (290 aa)    
Predicted Functional Partners:
AS27_03417
Mitochondrial assembly of ribosomal large subunit protein 1.
   
 
 0.910
AS27_14107
Uncharacterized protein.
   
 
 0.907
AS27_11164
Uncharacterized protein.
  
 
 0.898
AS27_01157
Uncharacterized protein.
  
 
 0.891
AS27_11901
60S ribosomal protein L26.
  
   0.885
AS27_09078
Uncharacterized protein.
   
   0.884
AS27_02708
Uncharacterized protein.
    
   0.866
AS27_08808
Mitochondrial ribosome-associated GTPase 1.
  
 
 0.853
AS27_13039
GTP-binding protein 8.
  
 
 0.803
AS27_13243
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
   0.733
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.