Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AS27_00466 | AS27_04487 | A0A087QMF7 | A0A087R4X0 | Striatin-3. | Steroid hormone receptor ERR2. | 0.523 |
AS27_03941 | AS27_04487 | A0A087R0B6 | A0A087R4X0 | Nuclear receptor coactivator 2. | Steroid hormone receptor ERR2. | 0.603 |
AS27_03941 | AS27_13237 | A0A087R0B6 | A0A087QTJ9 | Nuclear receptor coactivator 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.784 |
AS27_03941 | AS27_13465 | A0A087R0B6 | A0A087QZY6 | Nuclear receptor coactivator 2. | Nuclear receptor corepressor 1. | 0.662 |
AS27_04487 | AS27_00466 | A0A087R4X0 | A0A087QMF7 | Steroid hormone receptor ERR2. | Striatin-3. | 0.523 |
AS27_04487 | AS27_03941 | A0A087R4X0 | A0A087R0B6 | Steroid hormone receptor ERR2. | Nuclear receptor coactivator 2. | 0.603 |
AS27_04487 | AS27_05171 | A0A087R4X0 | A0A087QSY2 | Steroid hormone receptor ERR2. | Nuclear receptor-interacting protein 1. | 0.722 |
AS27_04487 | AS27_08649 | A0A087R4X0 | A0A087RAU5 | Steroid hormone receptor ERR2. | Striatin. | 0.523 |
AS27_04487 | AS27_09192 | A0A087R4X0 | A0A087QNR1 | Steroid hormone receptor ERR2. | Peroxisome proliferator-activated receptor gamma coactivator 1-alpha. | 0.856 |
AS27_04487 | AS27_09758 | A0A087R4X0 | A0A087R7S3 | Steroid hormone receptor ERR2. | CS domain-containing protein. | 0.581 |
AS27_04487 | AS27_11768 | A0A087R4X0 | A0A087RA15 | Steroid hormone receptor ERR2. | Nuclear receptor coactivator 1. | 0.603 |
AS27_04487 | AS27_12512 | A0A087R4X0 | A0A087RJL7 | Steroid hormone receptor ERR2. | Endoplasmin. | 0.554 |
AS27_04487 | AS27_13237 | A0A087R4X0 | A0A087QTJ9 | Steroid hormone receptor ERR2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.668 |
AS27_04487 | AS27_13465 | A0A087R4X0 | A0A087QZY6 | Steroid hormone receptor ERR2. | Nuclear receptor corepressor 1. | 0.808 |
AS27_05171 | AS27_04487 | A0A087QSY2 | A0A087R4X0 | Nuclear receptor-interacting protein 1. | Steroid hormone receptor ERR2. | 0.722 |
AS27_05171 | AS27_09192 | A0A087QSY2 | A0A087QNR1 | Nuclear receptor-interacting protein 1. | Peroxisome proliferator-activated receptor gamma coactivator 1-alpha. | 0.774 |
AS27_05171 | AS27_13465 | A0A087QSY2 | A0A087QZY6 | Nuclear receptor-interacting protein 1. | Nuclear receptor corepressor 1. | 0.434 |
AS27_08649 | AS27_04487 | A0A087RAU5 | A0A087R4X0 | Striatin. | Steroid hormone receptor ERR2. | 0.523 |
AS27_09192 | AS27_04487 | A0A087QNR1 | A0A087R4X0 | Peroxisome proliferator-activated receptor gamma coactivator 1-alpha. | Steroid hormone receptor ERR2. | 0.856 |
AS27_09192 | AS27_05171 | A0A087QNR1 | A0A087QSY2 | Peroxisome proliferator-activated receptor gamma coactivator 1-alpha. | Nuclear receptor-interacting protein 1. | 0.774 |
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