STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_11310Protocadherin Fat 4. (249 aa)    
Predicted Functional Partners:
AS27_11308
Protocadherin-23.
 
     0.643
AS27_10434
Catenin beta-1.
    
  0.455
AS27_11212
Junction plakoglobin.
    
  0.455
AS27_15728
Uridine-cytidine kinase 2.
    
  0.455
AS27_10824
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.455
AS27_07174
Uridine-cytidine kinase-like 1.
    
  0.455
AS27_01617
Uridine-cytidine kinase 1.
    
  0.455
AS27_07025
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.452
AS27_10892
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.452
AS27_13384
Catenin delta-1.
    
  0.431
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.