STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_02901Fidgetin-like 1; Belongs to the AAA ATPase family. (691 aa)    
Predicted Functional Partners:
AS27_13670
UBX domain-containing protein 7.
   
 0.961
AS27_07389
IST1.
    
 0.845
AS27_14427
Ubiquitin fusion degradation protein 1.
    
 0.819
AS27_01980
Ubiquitin thioesterase OTU1.
   
 0.790
AS27_04550
Ataxin-3.
    
 0.725
AS27_12425
Alpha-soluble NSF attachment protein.
    
 0.702
AS27_04161
Beta-soluble NSF attachment protein.
    
 0.702
AS27_02568
AN1-type zinc finger protein 4.
    
 0.701
AS27_11305
Peroxisomal membrane protein PEX13.
    
 0.688
AS27_04266
Peroxisome assembly protein 12.
    
 0.682
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.