STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_07719Autophagy-related protein 16-1. (568 aa)    
Predicted Functional Partners:
AS27_12270
WD repeat domain phosphoinositide-interacting protein 2.
   
 0.991
AS27_13044
Autophagy-related protein 3.
   
 0.989
AS27_15180
WD repeat domain phosphoinositide-interacting protein 1.
   
 0.987
AS27_01780
RB1-inducible coiled-coil protein 1.
   
 0.975
AS27_13588
Nucleotide-binding oligomerization domain-containing protein 1.
    
 0.934
AS27_07376
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 0.925
AS27_14197
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
 0.912
AS27_09622
Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
    
 0.834
AS27_09383
Ras-related protein Rab-1A.
    
 0.827
AS27_11295
Rab-like 6.
    
 0.827
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.