STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_13918Transmembrane protein 54. (129 aa)    
Predicted Functional Partners:
AS27_05592
Adenylate kinase 9.
    
  0.870
AS27_04563
Protein unc-79.
    
 0.755
AS27_04564
Protein unc-79.
    
 0.755
AS27_15830
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.627
AS27_15831
E3 SUMO-protein ligase RanBP2.
    
 0.627
AS27_04924
Lysine-specific demethylase 6A.
    
 0.598
AS27_05593
Adenylate kinase 9.
    
  0.577
AS27_02008
Retinoblastoma-binding protein 5.
    
 0.562
AS27_02568
AN1-type zinc finger protein 4.
    
  0.559
AS27_08358
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.555
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.