STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_15329Histone RNA hairpin-binding protein. (198 aa)    
Predicted Functional Partners:
AS27_12809
3'-5' exoribonuclease 1.
   
 
 0.811
AS27_03558
Nuclear cap-binding protein subunit 1.
   
 0.736
AS27_13845
U7 snRNA-associated Sm-like LSm10.
   
 
 0.724
AS27_11965
U7 snRNA-associated Sm-like LSm11.
     
 0.713
AS27_10446
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 
 0.679
AS27_15045
ERI1 exoribonuclease 2.
   
 
 0.659
AS27_15830
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
  0.629
AS27_15831
E3 SUMO-protein ligase RanBP2.
   
 
  0.629
AS27_06346
THO complex subunit 4.
   
 
  0.609
AS27_08981
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.595
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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