Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AS27_03558 | AS27_06346 | A0A087RD86 | A0A087R2B8 | Nuclear cap-binding protein subunit 1. | THO complex subunit 4. | 0.974 |
AS27_03558 | AS27_08981 | A0A087RD86 | A0A087R3F5 | Nuclear cap-binding protein subunit 1. | Small nuclear ribonucleoprotein Sm D3. | 0.975 |
AS27_03558 | AS27_10446 | A0A087RD86 | A0A087QH47 | Nuclear cap-binding protein subunit 1. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.971 |
AS27_03558 | AS27_11965 | A0A087RD86 | A0A087RET3 | Nuclear cap-binding protein subunit 1. | U7 snRNA-associated Sm-like LSm11. | 0.612 |
AS27_03558 | AS27_13845 | A0A087RD86 | A0A087RCN2 | Nuclear cap-binding protein subunit 1. | U7 snRNA-associated Sm-like LSm10. | 0.950 |
AS27_03558 | AS27_15329 | A0A087RD86 | A0A087RE01 | Nuclear cap-binding protein subunit 1. | Histone RNA hairpin-binding protein. | 0.736 |
AS27_03558 | AS27_15830 | A0A087RD86 | A0A087QVY9 | Nuclear cap-binding protein subunit 1. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.973 |
AS27_03558 | AS27_15831 | A0A087RD86 | A0A087QVZ0 | Nuclear cap-binding protein subunit 1. | E3 SUMO-protein ligase RanBP2. | 0.973 |
AS27_06346 | AS27_03558 | A0A087R2B8 | A0A087RD86 | THO complex subunit 4. | Nuclear cap-binding protein subunit 1. | 0.974 |
AS27_06346 | AS27_08981 | A0A087R2B8 | A0A087R3F5 | THO complex subunit 4. | Small nuclear ribonucleoprotein Sm D3. | 0.800 |
AS27_06346 | AS27_10446 | A0A087R2B8 | A0A087QH47 | THO complex subunit 4. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.657 |
AS27_06346 | AS27_13845 | A0A087R2B8 | A0A087RCN2 | THO complex subunit 4. | U7 snRNA-associated Sm-like LSm10. | 0.636 |
AS27_06346 | AS27_15329 | A0A087R2B8 | A0A087RE01 | THO complex subunit 4. | Histone RNA hairpin-binding protein. | 0.609 |
AS27_06346 | AS27_15830 | A0A087R2B8 | A0A087QVY9 | THO complex subunit 4. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.980 |
AS27_06346 | AS27_15831 | A0A087R2B8 | A0A087QVZ0 | THO complex subunit 4. | E3 SUMO-protein ligase RanBP2. | 0.980 |
AS27_08981 | AS27_03558 | A0A087R3F5 | A0A087RD86 | Small nuclear ribonucleoprotein Sm D3. | Nuclear cap-binding protein subunit 1. | 0.975 |
AS27_08981 | AS27_06346 | A0A087R3F5 | A0A087R2B8 | Small nuclear ribonucleoprotein Sm D3. | THO complex subunit 4. | 0.800 |
AS27_08981 | AS27_10446 | A0A087R3F5 | A0A087QH47 | Small nuclear ribonucleoprotein Sm D3. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.999 |
AS27_08981 | AS27_11965 | A0A087R3F5 | A0A087RET3 | Small nuclear ribonucleoprotein Sm D3. | U7 snRNA-associated Sm-like LSm11. | 0.951 |
AS27_08981 | AS27_13845 | A0A087R3F5 | A0A087RCN2 | Small nuclear ribonucleoprotein Sm D3. | U7 snRNA-associated Sm-like LSm10. | 0.997 |
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