STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_11903Vesicle transport protein SEC20. (170 aa)    
Predicted Functional Partners:
AS27_01703
RAD50-interacting protein 1.
    
 0.993
AS27_00601
Syntaxin-18.
   
 0.970
AS27_00374
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.961
AS27_06802
Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.
   
 0.907
AS27_14618
Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
   
 0.907
AS27_13843
Granulocyte colony-stimulating factor receptor.
   
 0.850
AS27_14243
Centromere/kinetochore protein zw10.
    
 0.848
AS27_06481
Vesicle-fusing ATPase.
    
 0.803
AS27_00464
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.746
AS27_12425
Alpha-soluble NSF attachment protein.
    
 0.717
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.