STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS27_09637Ubiquitin carboxyl-terminal hydrolase. (684 aa)    
Predicted Functional Partners:
AS27_11081
Transcription initiation factor TFIID subunit 10.
    
 0.876
AS27_12219
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.876
AS27_11672
Transcriptional adapter 3.
    
 0.870
AS27_04181
Ubiquitin-40S ribosomal protein S27a.
    
 0.870
AS27_14062
Transcription initiation factor TFIID subunit 9.
    
 0.869
AS27_00871
Ubiquitin-40S ribosomal protein S27a.
    
  0.856
AS27_10384
Transcription and mRNA export factor ENY2.
    
 0.843
AS27_15676
TATA box-binding protein-associated factor RNA polymerase I subunit B.
   
 0.842
AS27_11633
Ataxin-7.
    
 0.830
AS27_01701
Ataxin-7-like 1.
    
 0.830
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.