STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_00641Retrograde Golgi transport protein RGP1. (391 aa)    
Predicted Functional Partners:
RAB41
Ras-related protein Rab-6A.
    
 0.715
AS28_07281
Ras-related protein Rab-6A.
    
 0.715
VPS53
Vacuolar protein sorting-associated protein 53.
     
 0.701
RAB36
Ras-related protein Rab-36.
    
 0.674
VPS54
Vacuolar protein sorting-associated protein 54.
     
 0.671
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.656
ARL1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.597
COG1
Conserved oligomeric Golgi complex subunit 1.
   
 
  0.597
AS28_15183
Beta-soluble NSF attachment protein.
    
  0.578
ARFRP1
ADP-ribosylation factor-related protein 1.
    
  0.576
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.