STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEFTranscription factor VBP. (288 aa)    
Predicted Functional Partners:
AS28_14591
Uncharacterized protein.
   
 0.722
AS28_14014
Uncharacterized protein C1orf198.
   
 0.700
ATF4
Cyclic AMP-dependent transcription factor ATF-4.
   
 0.630
AS28_08544
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.619
AS28_09221
Uncharacterized protein.
   
 0.594
AS28_04090
Uncharacterized protein.
   
 0.582
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 0.541
AICDA
Single-stranded DNA cytosine deaminase.
   
 0.512
AS28_02682
Cytochrome b-c1 complex subunit 7.
   
 0.499
AS28_02994
Period circadian protein 2.
   
 0.492
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.