STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPF1Ribosome production factor 1. (287 aa)    
Predicted Functional Partners:
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
 
 0.996
BRIX1
Ribosome biogenesis protein BRX1.
   
 
 0.993
MAK16
Protein MAK16.
   
 
 0.990
EBNA1BP2
Putative rRNA-processing protein EBP2.
   
 
 0.983
RPF2
Ribosome production factor 2.
   
 
 0.979
AS28_14971
Guanine nucleotide-binding protein-like 3.
   
 
 0.977
NOC2L
Nucleolar complex protein 2.
   
 
 0.968
DDX18
RNA helicase.
   
 
 0.968
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.967
P2RY1
p2Y purinoceptor 1; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.959
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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