STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD9BTB/POZ domain-containing protein KCTD9. (374 aa)    
Predicted Functional Partners:
TOP2B
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.735
TOP2A
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.735
TMEM159
Promethin-A.
      
 0.626
AS28_11089
BTB/POZ domain-containing protein KCTD19.
     
 0.618
AS28_00117
Ankyrin repeat domain-containing protein 9.
      
 0.566
CUL3
Cullin-3; Belongs to the cullin family.
    
 
 0.534
CLRN3
Clarin-3.
      
 0.527
ERAL1
Era-type G domain-containing protein.
  
  
 0.517
TTI2
RING finger protein 122.
      
 0.515
UBOX5
RING finger protein 37.
      
 0.499
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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