STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP272 kDa type IV collagenase. (663 aa)    
Predicted Functional Partners:
HBEGF
Proheparin-binding EGF-like growth factor.
    
 0.937
TIMP2
Metalloproteinase inhibitor 2.
   
 0.793
TIMP3
Metalloproteinase inhibitor 3.
   
 0.673
MMP7
Stromelysin-1.
   
0.597
SPP1
Osteopontin.
   
 
 0.596
AS28_09248
Interstitial collagenase.
  
 
0.582
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.519
CD44
CD44 antigen.
   
 0.447
SCUBE1
Signal peptide, CUB and EGF-like domain-containing protein 1.
   
 0.439
AS28_03478
Signal peptide, CUB and EGF-like domain-containing protein 2.
   
 0.439
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.