Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AS28_09258 | AS28_12317 | A0A093P046 | A0A093P0X0 | Homeobox protein NANOG. | POU domain protein. | 0.839 |
AS28_09258 | AS28_14653 | A0A093P046 | A0A093NYJ8 | Homeobox protein NANOG. | Lymphoid enhancer-binding factor 1. | 0.533 |
AS28_09258 | LIN28A | A0A093P046 | A0A093NRH0 | Homeobox protein NANOG. | Protein lin-28 A. | 0.480 |
AS28_09258 | PRDM14 | A0A093P046 | A0A093NM29 | Homeobox protein NANOG. | PR domain zinc finger protein 14. | 0.541 |
AS28_09259 | AS28_12317 | A0A093NLL3 | A0A093P0X0 | Homeobox protein NANOG. | POU domain protein. | 0.839 |
AS28_09259 | AS28_14653 | A0A093NLL3 | A0A093NYJ8 | Homeobox protein NANOG. | Lymphoid enhancer-binding factor 1. | 0.533 |
AS28_09259 | LIN28A | A0A093NLL3 | A0A093NRH0 | Homeobox protein NANOG. | Protein lin-28 A. | 0.480 |
AS28_09259 | PRDM14 | A0A093NLL3 | A0A093NM29 | Homeobox protein NANOG. | PR domain zinc finger protein 14. | 0.541 |
AS28_12317 | AS28_09258 | A0A093P0X0 | A0A093P046 | POU domain protein. | Homeobox protein NANOG. | 0.839 |
AS28_12317 | AS28_09259 | A0A093P0X0 | A0A093NLL3 | POU domain protein. | Homeobox protein NANOG. | 0.839 |
AS28_12317 | LIN28A | A0A093P0X0 | A0A093NRH0 | POU domain protein. | Protein lin-28 A. | 0.675 |
AS28_12317 | PRDM14 | A0A093P0X0 | A0A093NM29 | POU domain protein. | PR domain zinc finger protein 14. | 0.624 |
AS28_14653 | AS28_09258 | A0A093NYJ8 | A0A093P046 | Lymphoid enhancer-binding factor 1. | Homeobox protein NANOG. | 0.533 |
AS28_14653 | AS28_09259 | A0A093NYJ8 | A0A093NLL3 | Lymphoid enhancer-binding factor 1. | Homeobox protein NANOG. | 0.533 |
AS28_14653 | PRDM14 | A0A093NYJ8 | A0A093NM29 | Lymphoid enhancer-binding factor 1. | PR domain zinc finger protein 14. | 0.526 |
CBFA2T2 | PRDM14 | A0A093NN37 | A0A093NM29 | Protein CBFA2T2. | PR domain zinc finger protein 14. | 0.775 |
CBFA2T2 | PRDM6 | A0A093NN37 | A0A093NT10 | Protein CBFA2T2. | Putative histone-lysine N-methyltransferase PRDM6. | 0.540 |
E2F1 | PRDM14 | A0A093NEU6 | A0A093NM29 | Transcription factor E2F1. | PR domain zinc finger protein 14. | 0.506 |
ESR1 | JUN | A0A093NZ15 | A0A093NJ70 | Estrogen receptor. | Transcription factor AP-1; Belongs to the bZIP family. | 0.803 |
ESR1 | PRDM14 | A0A093NZ15 | A0A093NM29 | Estrogen receptor. | PR domain zinc finger protein 14. | 0.518 |
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