STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_08828HMG box transcription factor BBX. (888 aa)    
Predicted Functional Partners:
ATXN1L
Ataxin-1-like.
    
 
 0.701
LAP3
Cytosol aminopeptidase.
      
 0.649
IL17RD
Interleukin-17 receptor D.
      
 0.636
GOT1
Aspartate aminotransferase.
      
 0.596
GOT2
Aspartate aminotransferase.
      
 0.596
SIN3B
Paired amphipathic helix protein Sin3b.
   
 
 0.541
FBXL4
F-box/LRR-repeat protein 4.
      
 0.520
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.491
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.