STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_10466Collagen alpha-2(IV) chain. (181 aa)    
Predicted Functional Partners:
COL4A2
Collagen alpha-2(IV) chain.
 
      0.899
COL4A5
Collagen alpha-5(IV) chain.
 
      0.899
AS28_06845
Collagen alpha-1(XXVI) chain.
  
  
 0.563
COL9A3
Collagen alpha-3(IX) chain.
  
  
  0.535
COLEC10
Collectin-10.
  
 
  0.532
C1QTNF2
Complement C1q tumor necrosis factor-related protein 2.
  
     0.528
C1QTNF7
Complement C1q tumor necrosis factor-related protein 7.
  
     0.527
C1QB
Complement C1q subcomponent subunit B.
  
     0.514
OTOL1
Otolin-1.
  
     0.509
COLEC11
Collectin-11.
  
 
  0.472
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.