STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin-3. (193 aa)    
Predicted Functional Partners:
AS28_00169
Bifunctional glutamate/proline--tRNA ligase.
   
    0.700
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.696
XPOT
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 
 0.682
IPO8
Importin-8.
   
  
 0.677
GPR133
Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.675
TNPO1
Transportin-1.
   
 
 0.667
AS28_08435
Serine/arginine-rich splicing factor 4.
   
 
 0.664
SRSF5
Serine/arginine-rich splicing factor 5.
   
 
 0.664
SRSF4
Serine/arginine-rich splicing factor 4.
   
 
 0.664
SRSF6
Serine/arginine-rich splicing factor 6.
   
 
 0.664
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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