STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZRANB2Zinc finger Ran-binding domain-containing protein 2. (316 aa)    
Predicted Functional Partners:
RPL32
60S ribosomal protein L32.
      
 0.641
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.586
TAF12
Transcription initiation factor TFIID subunit 12.
   
  0.566
SRSF11
Serine/arginine-rich splicing factor 11.
   
 0.549
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.549
SREK1
Splicing regulatory glutamine/lysine-rich protein 1.
   
 0.549
AS28_14167
Transcription initiation factor TFIID subunit 1.
     
 0.544
TAF3
Transcription initiation factor TFIID subunit 3.
     
 0.540
TAF13
Transcription initiation factor TFIID subunit 13.
   
 0.534
GTF2A2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
     
 0.530
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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