STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDP2Tyrosyl-DNA phosphodiesterase 2. (276 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
 
 0.654
TDP1
Tyrosyl-DNA phosphodiesterase 1.
   
  
 0.649
SUMO2
Small ubiquitin-related modifier.
   
 
 0.614
AS28_14361
Small ubiquitin-related modifier 3.
   
 
 0.614
ORC2
Origin recognition complex subunit 2.
      
 0.599
XRCC6
X-ray repair cross-complementing protein 5.
     
 0.581
AS28_02238
Uncharacterized protein C6orf62.
 
    
 0.568
UBB
Polyubiquitin.
    
 
 0.545
SUMO1
Small ubiquitin-related modifier.
   
 
 0.538
XRCC5
X-ray repair cross-complementing protein 5.
     
 0.519
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.