Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AS28_11211 | AS28_14877 | A0A093P1F0 | A0A093NTY1 | NADPH oxidase organizer 1. | Cytochrome b-245 heavy chain. | 0.561 |
AS28_11211 | DUOX2 | A0A093P1F0 | A0A093NS56 | NADPH oxidase organizer 1. | Dual oxidase 2. | 0.652 |
AS28_11211 | NCF1 | A0A093P1F0 | A0A093QYH4 | NADPH oxidase organizer 1. | Neutrophil cytosol factor 1. | 0.620 |
AS28_11211 | NCF2 | A0A093P1F0 | A0A093NTQ4 | NADPH oxidase organizer 1. | Neutrophil cytosol factor 2. | 0.853 |
AS28_11211 | NCF4 | A0A093P1F0 | A0A093P9S9 | NADPH oxidase organizer 1. | Neutrophil cytosol factor 4. | 0.491 |
AS28_11211 | NOX4 | A0A093P1F0 | A0A093NRU2 | NADPH oxidase organizer 1. | NADPH oxidase 4. | 0.749 |
AS28_11211 | RAC1 | A0A093P1F0 | A0A093NHJ9 | NADPH oxidase organizer 1. | Ras-related C3 botulinum toxin substrate 1. | 0.485 |
AS28_11211 | RAC2 | A0A093P1F0 | A0A093PLZ8 | NADPH oxidase organizer 1. | Ras-related C3 botulinum toxin substrate 2. | 0.485 |
AS28_11211 | RAC3 | A0A093P1F0 | A0A093NRQ8 | NADPH oxidase organizer 1. | Ras-related C3 botulinum toxin substrate 3. | 0.485 |
AS28_11211 | XK | A0A093P1F0 | A0A093NFE3 | NADPH oxidase organizer 1. | XK-related protein. | 0.561 |
AS28_14877 | AS28_11211 | A0A093NTY1 | A0A093P1F0 | Cytochrome b-245 heavy chain. | NADPH oxidase organizer 1. | 0.561 |
AS28_14877 | NCF1 | A0A093NTY1 | A0A093QYH4 | Cytochrome b-245 heavy chain. | Neutrophil cytosol factor 1. | 0.574 |
AS28_14877 | NCF2 | A0A093NTY1 | A0A093NTQ4 | Cytochrome b-245 heavy chain. | Neutrophil cytosol factor 2. | 0.657 |
AS28_14877 | NOX4 | A0A093NTY1 | A0A093NRU2 | Cytochrome b-245 heavy chain. | NADPH oxidase 4. | 0.553 |
DUOX2 | AS28_11211 | A0A093NS56 | A0A093P1F0 | Dual oxidase 2. | NADPH oxidase organizer 1. | 0.652 |
DUOX2 | NCF1 | A0A093NS56 | A0A093QYH4 | Dual oxidase 2. | Neutrophil cytosol factor 1. | 0.654 |
DUOX2 | NCF2 | A0A093NS56 | A0A093NTQ4 | Dual oxidase 2. | Neutrophil cytosol factor 2. | 0.649 |
DUOX2 | NCF4 | A0A093NS56 | A0A093P9S9 | Dual oxidase 2. | Neutrophil cytosol factor 4. | 0.529 |
DUOX2 | NOX4 | A0A093NS56 | A0A093NRU2 | Dual oxidase 2. | NADPH oxidase 4. | 0.578 |
NCF1 | AS28_11211 | A0A093QYH4 | A0A093P1F0 | Neutrophil cytosol factor 1. | NADPH oxidase organizer 1. | 0.620 |
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