STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_04234Cleavage and polyadenylation specificity factor subunit 4. (170 aa)    
Predicted Functional Partners:
WDR33
Pre-mRNA 3' end processing protein WDR33.
   
 0.994
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.994
SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.982
AS28_11620
E3 ubiquitin-protein ligase RBBP6.
    
 
 0.979
WDR82
Twinfilin-2.
   
 
 0.963
AS28_04946
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.946
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.942
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.938
AS28_11198
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.930
PAPOLG
Poly(A) polymerase gamma.
    
 0.925
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.