STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC18B1MFS-type transporter SLC18B1. (365 aa)    
Predicted Functional Partners:
CASK
Peripheral plasma membrane protein CASK.
     
 0.839
PANX
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.491
SLC3A1
Neutral and basic amino acid transport protein rBAT.
      
 0.487
SLC10A4
Sodium/bile acid cotransporter 4.
      
 0.483
AS28_14319
Ras-related protein Rab-3B.
     
 0.446
RAB3B
Ras-related protein Rab-3A.
     
 0.446
RAB3C
Ras-related protein Rab-3C.
     
 0.446
AMD1
S-adenosylmethionine decarboxylase proenzyme.
      
 0.426
RIMS3
Regulating synaptic membrane exocytosis protein 3.
     
 0.425
AS28_12120
Regulating synaptic membrane exocytosis protein 1.
     
 0.425
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.