STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_05384Lysosome-associated membrane glycoprotein 3. (190 aa)    
Predicted Functional Partners:
NPRL2
Nitrogen permease regulator 2-like.
    
 
 0.547
SEC13
Protein SEC13; Belongs to the WD repeat SEC13 family.
    
 
 0.538
RPTOR
Regulatory-associated protein of mTOR.
    
 
 0.537
NPRL3
Nitrogen permease regulator 3-like.
    
 
 0.512
WDR24
WD repeat-containing protein 24.
    
 
 0.509
AS28_08005
WD repeat-containing protein 59.
    
 
 0.501
SEH1L
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
   0.499
MIOS
WD repeat-containing protein mio.
    
   0.499
DEPDC5
DEP domain-containing protein 5.
    
   0.499
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.