STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HACL12-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (508 aa)    
Predicted Functional Partners:
PEX5L
PEX5-related protein.
 
  
 0.978
BCAT1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.936
ADHFE1
Fe-ADH domain-containing protein.
    
 0.915
AS28_12505
MKL/myocardin-like 1.
  
 
 0.903
IDH3A
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
 
 0.883
AS28_13314
Iso_dh domain-containing protein.
  
 0.871
SUGCT
Succinate--hydroxymethylglutarate CoA-transferase.
  
 
 0.829
AMACR
Alpha-methylacyl-CoA racemase.
  
 
 0.829
AS28_01675
Hydroxyacid oxidase 1.
  
 
 0.824
HAO2
Hydroxyacid oxidase 2.
  
 
 0.821
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.