Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VHLVon Hippel-Lindau disease tumor suppressor. (117 aa)    
Predicted Functional Partners:
TCEB1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.990
TCEB2
Transcription elongation factor B polypeptide 2.
    
 0.962
EPAS1
Endothelial PAS domain-containing protein 1.
    
 0.949
HIF1A
Hypoxia-inducible factor 1-alpha.
    
 0.942
RBX1
RING-box protein 1.
    
 0.920
AS28_04036
Hypoxia-inducible factor 1-alpha.
    
 0.866
UBXN7
UBX domain-containing protein 7.
   
  0.847
EGLN3
Egl nine 3.
    
 0.821
EGLN1
Egl nine 1.
    
 0.804
FN1
Fibronectin.
    
 
 0.796
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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