STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM2Malcavernin. (444 aa)    
Predicted Functional Partners:
KRIT1
Krev interaction trapped protein 1.
    
 
 0.932
PDCD10
Programmed cell death protein 10.
    
 
 0.912
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
    
 0.840
AS28_14719
Mitogen-activated protein kinase kinase kinase 3.
    
 0.840
ITGB1BP1
Integrin beta-1-binding protein 1.
    
 
 0.764
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
    
 0.689
AS28_05503
Protein HEG 1.
   
  
 0.560
MTMR9
Myotubularin-related protein 9.
   
 
 0.539
VCL
Vinculin.
    
 0.498
PXN
Paxillin.
    
 
 0.497
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.