STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNL1Thioredoxin-like 1. (248 aa)    
Predicted Functional Partners:
PSMD14
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.871
AS28_01559
Intersectin-2.
     
 0.867
COPS5
COP9 signalosome complex subunit 5.
   
 
 0.716
NARS
Asparagine--tRNA ligase, cytoplasmic.
   
  
 0.622
SKA1
Spindle and kinetochore-associated protein 1.
      
 0.617
PSMC3
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
   0.586
CLTC
Clathrin heavy chain 1.
   
 
  0.586
AS28_13479
26S proteasome non-ATPase regulatory subunit 4.
   
 
 0.564
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 
 0.563
AS28_14162
Lys-63-specific deubiquitinase BRCC36.
   
 
 0.557
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.